Skip to content

chore: release main - #5

Merged
sajor2000 merged 1 commit into
mainfrom
release-please--branches--main
Jun 3, 2026
Merged

sajor2000 merged 1 commit into
mainfrom
release-please--branches--main

Conversation

@github-actions

@github-actions github-actions Bot commented May 30, 2026 •

Copy link
Copy Markdown
Contributor

🤖 I have created a release beep boop

cli: 3.3.0

3.3.0 (2026-06-02)

Features

  • ce-datascience 40-skill release with workflow navigator and competitive ports (8777c24)
  • ce-datascience: add 7 skills, rewrite README with full attribution (5a4399a)
  • compat: MCP server portability + cross-platform install fixes (2962a26)
  • integrations: sync upstream plugin compatibility updates (#4) (8aaad87)
  • r-support: comprehensive R user support enhancement and plugin rebrand (cfb4d12)
  • workflows: harden installs and add publication tools (#9) (0521a38)

Bug Fixes

  • audit: align tests and source with ce-datascience scope (4a50494)
  • integrations: harden generated platform installs (#7) (3031940)
  • integrations: harden installs and MCP project roots (#8) (ae1b85f)
ce-datascience: 3.3.0

3.3.0 (2026-06-02)

Features

  • brainstorm: adapt rigor probes and terminology for study design and PICO/PECO framing (8c64d97)
  • ce-clif: pin v2.1.1 + add clifpy/R-template recipe references (9b63664)
  • ce-datascience 40-skill release with workflow navigator and competitive ports (8777c24)
  • ce-datascience: add 7 skills, rewrite README with full attribution (5a4399a)
  • ce-datascience: biomedical lifecycle skills + reviewers (Phase A+B) (f15597c)
  • checklists: add all 17 missing reporting checklists, closes #2 (e0c0dcd)
  • checklists: add RECORD and RECORD-PE reporting checklists (5a6a36a)
  • compat: MCP server portability + cross-platform install fixes (2962a26)
  • compound: adapt knowledge schema for data science categories and terminology (66ce867)
  • integrations: sync upstream plugin compatibility updates (#4) (8aaad87)
  • r-support: comprehensive R user support enhancement and plugin rebrand (cfb4d12)
  • reporting-guidelines: expand compliance system to 16 guidelines with provenance tracking (9202c68)
  • review: add R/Python DS reviewers and update code review dispatch for data science (8336bf8)
  • review: add reporting checklist and SAP-drift detection agents (f1fb047)
  • skills: add repo-signal language detection and CE_LANG routing (a4f71ca)
  • skills: CLIF-safe profile for consortium repos (mCIDE / clif-icu.com) (1bdd7be)
  • skills: trigger-rich descriptions + bundled scripts for Phase A+B skills (456dd9e)
  • work: add SAP tracking overlay and stack-profile-aware scaffolding (a28bb60)
  • workflow: Phase 1 - data lifecycle (QA gate, mapping reviewer, wave register/lock) (6129831)
  • workflow: Phase 2 - SAP lifecycle (amend tool, amendment reviewer, blinding-state awareness) (a42ab58)
  • workflow: Phase 3 - review and submission lifecycle (d27a44c)
  • workflow: Phase 4 - pilot, dedup, SAP-section ownership, render reviewers + tabular SAP companion (8709534)
  • workflows: harden installs and add publication tools (#9) (0521a38)
  • workflow: wire 13 biomedical skills into the CE lifecycle loop (a74f842)

Bug Fixes

  • audit: align tests and source with ce-datascience scope (4a50494)
  • ce-clif: correct CLIF v2.2.0 status from work-in-progress to obsolete (d579c47)
  • ce-clif: reduce bloat and enrich CLIF patterns from consortium repos (1f4d8e1)
  • ce-clif: tighten activation signals to prevent false positives on non-CLIF projects (5f0b8fa)
  • ce-code-review: tighten CLIF reviewer activation to match ce-clif routing (14b37e5)
  • integrations: harden generated platform installs (#7) (3031940)
  • integrations: harden installs and MCP project roots (#8) (ae1b85f)
  • workflow: make slash commands actually compose with current chat context (d27f0c1)
marketplace: 0.2.0

0.2.0 (2026-06-02)

Features

  • ce-datascience 40-skill release with workflow navigator and competitive ports (8777c24)
  • r-support: comprehensive R user support enhancement and plugin rebrand (cfb4d12)
cursor-marketplace: 0.2.0

0.2.0 (2026-06-02)

Features

  • ce-datascience 40-skill release with workflow navigator and competitive ports (8777c24)
  • r-support: comprehensive R user support enhancement and plugin rebrand (cfb4d12)

This PR was generated with Release Please. See documentation.

@github-actions
github-actions Bot force-pushed the release-please--branches--main branch from d79f578 to ea5f892 Compare May 30, 2026 14:22
@github-actions
github-actions Bot force-pushed the release-please--branches--main branch 2 times, most recently from c8f9606 to 70157bd Compare May 30, 2026 19:07
@github-actions
github-actions Bot force-pushed the release-please--branches--main branch from 70157bd to f7d1015 Compare June 2, 2026 20:05
@sajor2000
sajor2000 merged commit e114f7d into main Jun 3, 2026
@github-actions

github-actions Bot commented Jun 3, 2026

Copy link
Copy Markdown
Contributor Author

sajor2000 added a commit that referenced this pull request Oct 21, 2026
Close the journal-selection half of audit gap #5 with a new skill that
matches a finished manuscript or abstract to candidate journals:

- builds a 5-8 candidate pool from each journal's own aims-and-scope page
  read via web tools, never from memory or a third-party summary;
- gathers scope-fit evidence by searching PubMed restricted to each
  candidate journal for similar recent studies (count and recency);
- runs a legitimacy screen verifying each candidate's indexing claims
  against the NLM Catalog or DOAJ, flagging unverifiable claims, copycat
  names, and APC-only venues instead of silently dropping or accepting
  them;
- applies the author's must-haves (indexing, access policy and fees,
  review speed) as hard filters, ranks with every cell sourced or marked
  unknown, and recommends a target plus two backups, leaving the choice
  to the author.

Sourcing rules are the core discipline: no impact factor, acceptance
rate, turnaround, or APC from memory; every metric carries a source URL
and date or is marked unknown. Egress mirrors the other research skills:
searches carry study topics, designs, and journal names only.

The listing budget rises from 11,500 to 11,700 for the 68th skill
(11,686 total, the same ~172-char average per skill), and every
displayed count surface (READMEs, website, brand SVG) moves 67 -> 68.
Eval sets follow the skill-creator contract (3 evals, 10/10 triggers).
The audit doc records gap closures: #2 (PR #138), #4 (PR #140), and the
journal-selection half of #5, with the ICMJE COI half left open as a
decision. Description fingerprints regenerated from history.
sajor2000 added a commit that referenced this pull request Oct 21, 2026
…es (#153)

MedSci audit gap #5 remainder (submission lane; closes the open decision in
#143 by implementing Option B): the submission lane now handles ICMJE COI
instead of demanding a standalone skill.

- SKILL.md step 4c: collect each author's ICMJE disclosure data (financial
  activities, funding, affiliation; ICMJE Recommendations II.D), write
  form-ready data only under manuscript/coi/ — never sign for an author —
  and cross-check the manuscript's COI statement against the collected data
  and every funder named in manuscript, cover letter, or registry. Missing
  statement, funder in one source but not another, or a "no conflicts"
  claim contradicted by the data blocks the package.
- journal-package-checklist.md: matching checklist item.
- evals: COI expectations folded into evals 1 and 3 (fixed shape: 3 evals,
  20 triggers), one trigger query swapped for the COI form-data ask, and a
  new repository-owned behavioral case method-submission-package-coi-cross-
  check (funder named in Funding, absent from a no-conflicts statement ->
  readiness blocked; no signoff) with synthetic fixtures only.

Closes #143

Co-authored-by: factory-droid[bot] <138933559+factory-droid[bot]@users.noreply.github.com>
sajor2000 added a commit that referenced this pull request Oct 21, 2026
Gaps #3, #5, #7, #10 closed (PRs #150, #151, #153, #154); #1, #6, #8
tracked as issues #141, #144, #146 with scoping; #9 wontfix as #147.

Co-authored-by: factory-droid[bot] <138933559+factory-droid[bot]@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Projects

None yet

Development

Successfully merging this pull request may close these issues.

feat: Add STROBE extension checklists (RECORD, RECORD-PE, STROBE-MR, STREGA)

1 participant