fix: normalize preferred-name ranking comparisons - #174
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- normalize PREFERRED_NAME and candidate term through the existing Rust-backed batch normalizer before the level-one preferred-name comparison - preserve the historical raw exact-match boost and all nonmatching ranking behavior - cover reordered, inflected, and genuinely nonmatching preferred names Verified: tests/test_fullmap.py 61 passed; tests/test_nlp.py 15 passed; pyright 0 errors; ruff check and format clean.
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SkyeAv
added this pull request to stack #177
September 15, 2026 17:41
SkyeAv
marked this pull request as ready for review
September 15, 2026 17:42
SkyeAv
removed this pull request from stack #177
September 15, 2026 17:50
SkyeAv
changed the base branch from
stronger-l1/fullmap-v6
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stronger-l1/python-level-one
September 15, 2026 17:51
SkyeAv
added this pull request to stack #179
September 15, 2026 17:51
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Sep 15, 2026
Cut 19.0.0 and bump the package version in pyproject.toml, CITATION.cff, and uv.lock. Major: five breaking changes ship. The `tablassert` console command now requires the optional `[cli]` extra, since `cyclopts` and `rich` left the base install (#187). Level-one normalization redefines fullmap keys as cleaned Unicode-lowercase, Porter2-normalized, byte-ordered token sets and moves the database to schema v6, so every schema-v5 fullmap is rejected and must be rebuilt (#171, #172, #174, #175, #176). `build-fullmap --aria2c` is gone -- aria2c is used automatically whenever the `[aria2]` extra is installed (#178) -- and `--taxon-allowlist` is gone because the built-in top-100 experimental-taxon allowlist now applies to every build, guarding both reuse paths by `META.taxon_allowlist` identity (#153). Logging now requires the `[log]` extra and is fully disabled without it (#152). Features: `tablassert.net` is a new stdlib-only transient/permanent classification and retry seam shared by the agent and the BABEL downloader (#163, #164), with one bounded jittered retry layer across the inner agent, reflexion, and judge (#167) and machine-readable `error_code` values on skipped checkpoint records (#166). `build-kg` gained an automatic ephemeral shared-prefix TCode cache keyed by content-addressed XXH64 op digests (#155-#159, #161). The `--distill` corpus became schema-uniform v2 with a sibling `outcomes.ndjson`, a deterministic `RewardConfig`-tunable reward, and the new zero-dependency `tablassert distill-weigh` command (#180-#183). `CLASS_FIELD_OVERRIDES` grants the DAKP sparse qualifier stack on the pinned association classes (#188). Fixes: `distill-export` partitions its corpus by content and unions the schema across record files, so a mixed v1/v2 directory no longer CastErrors or silently stringifies a column (#184); BABEL retry warnings survive the loguru sink; PMC downloads are idempotent, atomic, and bounded-parallel (#165); reflexion and judge prompts are hard-bounded (#168). Changelog: - versioned the Unreleased section as 19.0.0 - 2026-09-15 - merged three duplicate `### Added` blocks into one - moved the two `BREAKING:` entries from `### Changed` into `### Breaking Changes` and added a `**Migration:**` note to all five - added PR links to all 17 entries, which carried none - added the missing entries: the distill v2 corpus/reward/distill-weigh stack (#180-#183), the distill-export schema-drift fix (#184), the TCode run-cache detail (#155-#161), and the README badge removal (#154) Docs: none needed here. Every shipped doc change landed with its own PR, and the docs source-of-truth gate passes against the bumped tree. Testing: - make check -> exit 0 - uv run ruff check . -> All checks passed! - uv run pyright -> 0 errors, 0 warnings, 0 informations - uv run pytest -> 1622 passed, 52 skipped - cargo test --manifest-path rust/Cargo.toml -> 156 passed, 0 failed - cargo clippy --all-targets -- -D warnings -> clean - uv lock --check -> resolved 169 packages, lock current - uv run mkdocs build --strict -> exit 0 - docs SSOT + CLI coverage after the changelog edit -> 204 passed
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Fixes preferred-name ranking so the PR boost survives the normalized v6 keys: both sides of the comparison now go through the same Rust-backed normalizer.
Ranking (
src/tablassert/fullmap.py)filter_and_ranknormalizesPREFERRED_NAMEandtermvia the existing_normalize_terms_series/rs.normalize_termsbatch helper before the level-one preferred-name equality, so reordered (Oral Aspirin) and inflected (Oral Aspirins) preferred names still earn the boost against the stored keyaspirin oral.Tests (
tests/test_fullmap.py)PR=250), inflected preferred name earns it, genuinely non-matching name does not (PR=500); all pre-existing assertions, includingtest_pr_case_insensitive_preferred, pass unmodified.Testing
uv run pytest tests/test_fullmap.py -n 0 -q→61 passeduv run pytest tests/test_nlp.py -n 0 -q→15 passeduv run pyright src/tablassert/fullmap.py tests/test_fullmap.py→0 errors;ruff check/format --check→ clean