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smith-waterman-algorithm

Here are 7 public repositories matching this topic...

CharliesCodes / bioinformatics

A compilation of all the programs in my bioinformatics course

bioinformatics pattern-matching udemy global-alignment sequence-alignment de-novo-assembly needleman-wunsch-algorithm semiglobal local-alignment udemy-course smith-waterman-algorithm semiglobalmatching free-shift-alignment mapping-assembly

Updated Jan 12, 2023
Python

Seb943 / Smith_Waterman_Py

Implementing the Smith-Waterman algorithm in Python

python bioinformatics smith-waterman dynamic-programming bioinformatics-scripts bioinformatics-tool smith-waterman-algorithm

Updated Jan 12, 2021
Python

Noorts / DLSA

🧬 Distributing Local Sequence Alignment using Volunteer Computing

distributed-systems bioinformatics crowdsourcing sequence-alignment smith-waterman-algorithm

Updated Jan 13, 2024
Python

quyixiang / Map_miRNA_targets

python sequence-alignment smith-waterman-algorithm

Updated Jan 21, 2020
Python

Ronald-Weil / Longest-Common-Subsequence

Longest Common Subsequence algorithm. Global Alignment is the Needleman Wunsche algorithm and the local alignment is Smith Waterman algorithm

smith-waterman needleman-wunsch backtracking dynamic-programming backtracking-algorithm subsequence-matching needleman-wunsch-algorithm smith-waterman-algorithm

Updated Nov 22, 2023
Python

didar00 / Global-and-Local-Alignment-Algorithms

Implementations of Needleman-Wunsch (global alignment) and Smith-Waterman (local alignment) algorithms using Python.

python bioinformatics sequence-alignment needleman-wunsch-algorithm smith-waterman-algorithm

Updated Dec 10, 2021
Python

Martinaa1408 / Computational_Method

Course notebooks and scripts on Python, data structures, Linux and sequence alignment.

python lists strings function file cycle needleman-wunsch-algorithm smith-waterman-algorithm try-except pam250

Updated Feb 27, 2026
Python

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