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interferon

Here are 3 public repositories matching this topic...

SamSilmarilData / NeuroGut-MetaSeq

Cross-study RNA-seq meta-analysis of microglial transcriptomic signatures in response to gut microbiome depletion and microbial metabolite treatment.

Updated Oct 21, 2026
Python

Varun-U-Gowda / adar1-scrna-melanoma

scRNA-seq of ADAR1-KO melanoma TME — pDC/monocyte ISG programs, PAGA pseudotime, TCGA SKCM survival validation | Scanpy · Python

python bioinformatics cancer-genomics survival-analysis scrna-seq single-cell tcga-data melanoma tumor-microenvironment scanpy interferon paga pseudotime-trajectory cancer-immunology adar1

Updated Jun 7, 2026
Python

gmiliarakis / knowledge-or-sparsity-sc-vae

Knowledge or sparsity? A controlled test of gene set masks in an interpretable single-cell VAE.

benchmark bioinformatics gene-sets deep-learning computational-biology pytorch scrna-seq single-cell msigdb pathway-analysis variational-autoencoder single-cell-rna-seq explainable-ai interpretable-machine-learning prior-knowledge interferon pbmc negative-controls biologically-informed-neural-networks

Updated Oct 23, 2026
Python

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