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Dev - #124

Merged

davidsebfischer merged 27 commits into

Oct 31, 2019

Merged

Dev#124
davidsebfischer merged 27 commits into
masterfrom
dev

Commits on Aug 27, 2019
- intermediate commit towards new pairwise API
  davidsebfischer
  committed
  e472ef6
Commits on Aug 28, 2019
- finished new pairwise interface
  davidsebfischer
  committed
  3439ecd
- improved conintuous model interface
  davidsebfischer
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  0a5f25f
- fixed error in plotting gene fits if data is sparse
  davidsebfischer
  committed
  e97389e
- added missing flatten to array in plot by gene
  davidsebfischer
  committed
  9c00905
Commits on Aug 29, 2019
- supported interpolation x axis in plots
  davidsebfischer
  committed
  1d445dc
- fixed constraints interface
  davidsebfischer
  committed
  01d446c
Commits on Aug 30, 2019
- improved handling of constraints in wald test with respect to continuous models
  davidsebfischer
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  dbef0d3
- Merge branch 'new_pairwise_api' into dev
  davidsebfischer
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  9f00b6d
- fixed bug in non lazy z test fold change computation
  davidsebfischer
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  17e1a33
- incremented batchglm dependency
  davidsebfischer
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  d102989
- added size factor unit test
  davidsebfischer
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  cffc1cd
- fixed size factor parsing based on batchglm InputData input objects
  davidsebfischer
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  3b403b5
- added size factors to continuuos unit test
  davidsebfischer
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  7538e1a
Commits on Sep 3, 2019
Commits on Sep 4, 2019
Commits on Oct 31, 2019
- batchglm numpy backend support functional from diffxpy
  davidsebfischer
  committed
  9b3ea33
- added backend choice in all diffxpy tests
  davidsebfischer
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  e3e7ef3
- corrected formula documentation of lrt()
  davidsebfischer
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  ffbd58d
- fixed formula documentation of wald()
  davidsebfischer
  committed
  0aa7def
- updated batchglm requirements
  davidsebfischer
  committed
  f60e68c
- Merge pull request #123 from theislab/tf2_compatibility
  davidsebfischer
  authored
  df68981