popgenmethods

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1. smcpp smcpp Public

   SMC++ infers population history from whole-genome sequence data.

   C++ 178 35

2. momi2 momi2 Public

   Infer demographic history with the Moran model

   Python 52 10

3. pyrho pyrho Public

   Fast inference of fine-scale recombination rates based on fused-LASSO

   Python 63 7

4. SINGER SINGER Public

   Sampling and inference of genealogies with recombination

   C++ 62 16

5. lecture_notes lecture_notes Public

   Lecture Notes on Computational and Mathematical Population Genetics

   202 15

6. LDhelmet LDhelmet Public

   Software package for estimating fine-scale recombination rate.

   C++ 19 2