Doctor mutation-scope repair

.version

@@ -1 +1 @@
-0.4.0-pre-alpha-v6
+0.4.0-pre-alpha-v7

cli/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "shared-context-engineering"
-version = "0.4.0-pre-alpha-v6"
+version = "0.4.0-pre-alpha-v7"
 edition = "2021"
 description = "Shared Context Engineering CLI"
 license = "Apache-2.0"

cli/src/services/doctor/fixes.rs

@@ -1,15 +1,42 @@
-use super::types::{DoctorFixResultRecord, FixResult, ProblemFixability};
+use super::types::{
+    DoctorFixResultRecord, DoctorProblem, FixResult, IntegrationTarget, ProblemCategory,
+    ProblemFixability,
+};
 use super::HookDoctorReport;
 
-pub(super) fn build_manual_fix_results(report: &HookDoctorReport) -> Vec<DoctorFixResultRecord> {
+pub(super) fn build_manual_fix_results(
+    report: &HookDoctorReport,
+    attempted_mutation_scope_targets: &[IntegrationTarget],
+) -> Vec<DoctorFixResultRecord> {
     report
         .problems
         .iter()
         .filter(|problem| problem.fixability == ProblemFixability::ManualOnly)
+        .filter(|problem| {
+            !owned_by_attempted_mutation_scope_repair(problem, attempted_mutation_scope_targets)
+        })
         .map(|problem| DoctorFixResultRecord {
             category: problem.category,
             outcome: FixResult::Manual,
-            detail: format!("{} Manual remediation is still required.", problem.summary),
+            detail: manual_fix_detail(problem),
         })
         .collect()
 }
+
+fn owned_by_attempted_mutation_scope_repair(
+    problem: &DoctorProblem,
+    attempted_mutation_scope_targets: &[IntegrationTarget],
+) -> bool {
+    problem.category == ProblemCategory::MutationScopeHealth
+        && problem
+            .mutation_scope_target
+            .is_some_and(|target| attempted_mutation_scope_targets.contains(&target))
+}
+
+fn manual_fix_detail(problem: &DoctorProblem) -> String {
+    if problem.category == ProblemCategory::MutationScopeHealth {
+        problem.remediation.clone()
+    } else {
+        format!("{} Manual remediation is still required.", problem.summary)
+    }
+}