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Neo4j projection - #12

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pavuluri merged 28 commits into
codellm-devkit:mainfrom
lamwassi:Neo4j-projection
Oct 9, 2026
Merged

pavuluri merged 28 commits into
codellm-devkit:mainfrom
lamwassi:Neo4j-projection

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@lamwassi

@lamwassi lamwassi commented Oct 6, 2026 •

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Motivation and Context

Second projection of the frozen canonical v2 envelope into a labeled property graph
(--emit neo4j), keyed on the identical can:// ids so analysis.json and the graph join on
one string and are interchangeable. Vocabulary is GO_/Go-namespaced for a polyglot database,
with the neutral :Artifact/:Package/:ConfigKey layer reused verbatim. Design + decisions:
docs/design/Neo4j_projection/specs/neo4j-projection.md; milestones/gates in
docs/design/Neo4j_projection/roadmap.md.

Closes #11 (M1: the internal/neo4j/schema.go contract + conformance scaffold + --emit schema),
whose declared vocabulary the projector and writers in this PR are built on and held to.

Tracking note: the parent Neo4j issue and the M7 python-sdk GoAnalysisBackend child are
drafted under epic codellm-devkit/.github#94 (docs/design/Neo4j_projection/issues/) but not
yet filed upstream
— lamwassi is pull-only on the upstream org, so a maintainer must file the
parent, attach it as a native sub-issue of #94, and attach #11 (and the SDK child when filed)
under it. This PR does not and cannot create that linkage.

This PR also carries a fix for a determinism defect surfaced during release verification — see
"How Has This Been Tested?".

How Has This Been Tested?

Full suite green on the pushed commit (go test ./... -count=1), and the analyzer release gates
run on the exact commit:

  • Determinism (was failing, now fixed). Go permits multiple package-level func init() per
    package (one per file), all sharing the signature <pkgpath>.init. The emitter's flat
    signature→id index collapsed those distinct callables with last-writer-wins over a Go map, so
    the call_graph edge set varied run to run and failed the gate. Fixed by resolving an edge's
    source by (signature, declaring file). New CI-visible gate over the chi fixture (the only
    one with multiple init per package) rebuilds from disk 16× and asserts a byte-identical
    call_graph:

    --- PASS: TestDeterminism_FreshBuildsByteIdentical (8.75s)
    --- PASS: TestInitCollision_DistinctNodesAndEdges (0.56s)
    

    End to end, 8 cold runs of cango -i testdata/chi -a 2 -j 1 --eager now hash identically, and
    -j 1 == -j 8 byte-for-byte.

  • Cross-projection. On testdata/chi, the Neo4j projection's GO_CALLS data rows (117) equal
    the JSON call_graph edge count (117); containment GO_HAS_* edges are the documented extra.
    The projection is itself byte-identical across cold runs.

  • Monotonicity. testdata/greeter L1 ⊆ L2: the only symbol_table change L1→L2 is the
    sanctioned callee: null → id backfill.

  • Regression. greeter / generics / multipackage emit cleanly (3 / 7 / 9 edges),
    unchanged.

Breaking Changes

None. --emit neo4j and --emit schema are additive projections; the default --emit json
output is unchanged except that duplicate-init call_graph edges now resolve deterministically to
their own file's init node (previously nondeterministic — a bug fix, not a contract change). The
GoCallEdge.SourcePath field added for the fix is internal (json:"-") and not part of the v2
output schema.

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)
  • Documentation update

Checklist

  • I have read the Codellm-Devkit Documentation
  • My code follows the repository's style guidelines
  • New and existing tests pass locally
  • I have added appropriate error handling
  • I have added or updated documentation as needed — README/docs-site updates for --emit neo4j
    are tracked as the Neo4j parent issue's closeout; this PR adds the design specs under
    docs/design/Neo4j_projection/.

Additional context

The Neo4j projection reuses the emitter's stamped can:// ids (it mints none of its own), so the
determinism fix in the emitter is inherited by the graph with no projector change. The schema
declares the full reserved L3/L4 overlay now; the projector walks it and emits zero rows until
those levels land — additive, no schema-contract change when they do.

lamwassi and others added 26 commits September 28, 2026 22:13
Roadmap, cross-repo spec, schema decisions, and drafted parent/child issue
bodies for migrating codeanalyzer-go and its python-sdk Go models to the v2
canonical schema. Reach: L1 + L2 to parity; L3/L4 deferred to a later train.

Group A vocabulary (can:// ids, span.bytes UTF-8) decided once here per the
parity clause, since L3/L4 reuse it verbatim. Full transcript in
docs/design/specs/v2-l1-emission.md and CLAUDE.md.
Add the flags the CLDK CLI contract requires so the SDK facade can shell
out to the Go backend with the same code path as the other language
backends:

- --emit <json|neo4j|schema>: output projection selector. neo4j and
  schema return a clear non-zero "not yet implemented" error (never a
  silent fallback to JSON) until the Neo4j child lands. schema needs no
  --input, matching the contract.
- --app-name: application anchor for can://go/<app> ids and the Neo4j
  :Application node; defaults to the input dir base name.
- --neo4j-uri/user/password/database: accepted and validated now with
  explicit-flag > env-var > default precedence; consumed by the Neo4j
  child.
- -j/--jobs: worker parallelism, defaulting to CPU cores.

No v2 emission logic yet; default output stays the v1 JSON shape.
Declare the v2 canonical-schema Go types in internal/schema/v2, a
faithful transcript of the keystone (canonical-schema.md) and the
Go-specific leaf decisions in CLAUDE.md.

Models the L1 additive containment tree
(application -> module -> type -> callable -> body) with typed edge
overlays, plus the L2 refinement/edge slots so the shape is stable:

- Span{start,end,bytes} with UTF-8 byte offsets into module.source.
- Module carries source once; no per-node code field.
- Type.kind (struct|interface|alias|defined) replaces v1 is_interface;
  base_types (embedding) vs interfaces (computed satisfaction).
- Callable.error_channel, nested callables{} for closures, metrics map.
- BodyNode 'call' with the sanctioned callee null->id refinement slot
  (pointer, the one allowed null) and is_goroutine/is_deferred.
- Edge{src,dst,prov,weight} for call_graph.

No emitter or wiring yet; these types are not referenced by any code
path. L3/L4 fields (cfg/cdg/ddg/param_*) are deliberately not declared.
Add the Group A identity/positioning helpers in internal/schema/v2,
pure functions so they are testable in isolation and reused verbatim by
the deferred L3/L4 train:

- can:// durable-id builders (AppID/ModuleID/TypeID/CallableID) that
  assemble the containment path can://<lang>/<app>/<file>/<type>/<sig>,
  with signatureOf() output as the last segment.
- @line:col ordinal-id builders (OrdinalID/TagID/LocalID) for body nodes
  below the callable line.
- NewSpan + Span.Slice: build a span from line/col and UTF-8 byte
  offsets, and slice module.source in O(1) (the replacement for the v1
  per-node code field), degrading to "" on a malformed span.

Unit tests reproduce the keystone worked-example id chain and cover path
normalization, module-level function parents, ordinal/tag ids, and span
slicing edge cases.

Not wired into any emitter yet.
Add the v2emit package with lineIndex: reads a file's source once and
maps 1-based (line, col) positions to UTF-8 byte offsets, the one new
datum the v2 span needs. go/token columns are byte columns, so no
rune/byte reconciliation is required.

This keeps the v1 model diff-free (per the migration spec): the emitter
derives span.bytes from the existing line/col positions instead of
threading offsets through internal/schema. lineEndOffset/lineLen give a
line-only v1 position (callables/types carry no columns) a precise end.

Positions outside the file clamp to [0, len(source)] rather than
panicking. Tests cover line-start tabulation, offset lookup, clamping,
the last-line-without-newline case, and empty source.

Emitter tree walk lands next; nothing wired yet.
Emit() transforms the v1 GoApplication into the v2 Analysis payload: a
pure re-serialization walking application -> module -> type -> callable
-> body, computing no new facts beyond span byte offsets.

- Module carries source once (read from projectDir/relPath); every node
  span slices off it via the lineIndex-derived byte offsets.
- can:// ids assembled from the id builder, signatureOf() as last
  segment; methods resolve under their receiver type's callables{}.
- type.kind collapses is_interface (struct|interface); base_types kept;
  error-typed returns lift into error_channel; cyclomatic into metrics;
  closures nest in callables{}.
- body holds one 'call' node per call site keyed by line:col, with the
  callee null->id slot carried straight from the v1 pointer.
- call_graph renamed to {src,dst,prov,weight}.

Also drop omitempty from BodyNode.Callee so the sanctioned refinement
slot always serializes (null at L1, id at L2) as the keystone requires.

Tests build the greeter fixture through the real symbol-table builder
and assert the envelope, module source/ids, span slicing, call-node
bodies, callee-null serialization, dropped is_constructor_call, and
type/method kinds. Not wired to the CLI yet.
Wire the v2 emitter behind an opt-in flag. Default stays the v1 shape so
the current SDK keeps parsing output during the migration; --analysis-
schema 2 emits the canonical v2 tree.

- Add options.SchemaVersion (1 default, 2 v2) and AnalyzerVersion.
- core.RenderJSON centralizes the v1/v2 marshal decision so the stdout
  and file paths agree; WriteOutput now takes opts and routes through it.
  An unknown schema returns a non-zero error, never a silent fallback.
- --analysis-schema flag; --app-name/version threaded into the v2
  manifest (v2 surfaces the analyzer version, which v1 never carried).

Update WriteOutput callers (now opts-based) in core tests. CLI tests
assert the default is v1 (top-level symbol_table, no schema_version),
that --analysis-schema 2 emits schema_version 2.0.0 with
application.id can://go/greeter, and that an unknown schema errors.
Lock the v2 L1 output shape against a known multi-file fixture so the
level cannot silently regress. Asserts concrete values for every item on
the L1 coverage checklist (testing-and-validation.md):

  - multi-file compilation unit: four modules keyed by relative path,
    each with source-once and a whole-file span that slices back
  - exported + unexported symbols (Worker.Run vs Worker.execute)
  - interface kind collapse (Processor -> kind=interface)
  - error_channel from an error-typed return (Processor.Process)
  - variadic parameter (Combine(results ...Result))
  - language-specific call flag (is_goroutine on `go w.execute(...)`)
  - sanctioned callee:null refinement slot present at L1
  - can:// durable ids at module/type/callable depth

Plus the superset gate: walk the same v1 model the emitter walked and
assert every file/type/method/function reappears in v2, and that the
sanctioned drops (is_constructor_call, per-node code) are absent from the
serialized payload.
L2 is a pure refinement over the L1 tree: it fills the sanctioned
callee null->id slot and translates call_graph edge endpoints onto
real callable ids. Both need one thing v1 does not have: a mapping from
v1 signature identity to v2 can:// node id.

Add buildSigIndex, a one-pass signature->id index built with the same id
builders emitCallable uses, so an indexed id is byte-identical to the id
the callable node carries (no dangling endpoints by construction). Then:

  - emitBody: backfill body.callee to the callee's can:// id when the
    resolver-set signature names an in-tree callable; keep it null for
    external/stdlib callees (the honest-unresolved fallback).
  - emitCallGraph: map src/dst from v1 signatures to can:// ids; drop any
    edge whose endpoint does not resolve rather than emit a dangling one
    (defensive — the v1 resolver only emits in-project targets).

At L1 (no resolver run) callee stays null, so L1 output is unchanged.
Lock the v2 L2 output shape by building the fixture through the real
resolver (the -a 2 wiring) and asserting the L2 checklist
(testing-and-validation.md):

  - no dangling endpoints: every edge src/dst resolves to a real
    callable id in the tree
  - every edge carries a non-empty prov naming the resolver
  - a NAMED expected edge (Worker.Run -> Worker.execute) by exact
    can:// id pair, so the gate proves correctness not just non-emptiness
  - a NAMED cross-package edge (main -> server.New)
  - callee backfilled to an in-tree can:// id on the goroutine call site
  - the L1 ⊆ L2 superset: emitting the same model at level 1 vs 2 leaves
    every module/type/callable id, span, kind and body node identical,
    changing only callee null -> id (the one sanctioned mutation).
The real-app eval (dae/openbao/cockroach) surfaced a datamodel collision:
v2 nests a method under its receiver type, but Go allows a method to be
declared in a different file than its type, so span.bytes computed against
the nesting module's source collapse to empty (~3292 cases; cobra clean).

Design-loop decision (Go-only for now; cross-language parity deferred):
add an optional callable.source_file field, present only when the declaring
file differs from the nesting module. span.bytes then index that file's
module.source; text = symbol_table[source_file].source[span.bytes] when
present, else the nesting module. Containment stays receiver-based.

Records the decision in the committed spec and CLAUDE.md; python-sdk
source_file support is a tracked follow-up on the SDK rung.
A Go method may be declared in a different file than its receiver type.
The v2 tree nests it under the receiver type's module, but its line/col
positions are relative to its OWN file, so computing span.bytes against the
nesting module's source collapsed them to an empty [n,n] slice (~3292 cases
across dae/openbao/cockroach; cobra clean).

Compute a cross-file method's span against its declaring file (c.Path) via a
per-file lineIndex cache, and record that file in the new optional
callable.source_file field. Text recovery: symbol_table[source_file].source
[span.bytes] when set, else the nesting module. Closures inherit their
enclosing callable's file. Containment stays receiver-based.

Adds TestGateL1_CrossFileMethodSourceFile over the multipackage fixture
(Server declared in server.go, its Describe method in middleware.go):
asserts source_file names the declaring file, the span is non-empty, and it
slices to the method text; plus the negative case (in-file method carries no
source_file). Design: docs/design/specs/v2-l1-emission.md, CLAUDE.md.
cgo synthesizes wrapper functions (_Cfunc_*, _Cgo_*, _cgo_runtime_*) into a
generated file under $GOCACHE; go/packages resolves their token.Pos to that
cache path. Emitting them produced callables whose source_file pointed at the
build cache and whose span could not be sliced against any project module
(ISSUE-2 in the real-app eval: 85 such callables on cockroach, 106 validation
failures at L1 and L2; cobra/dae/openbao have no cgo and were unaffected).

These are toolchain artifacts, not project source. buildCallable now returns
nil when the declaration's file is not within projectDir, at the point its
(cache) file is first known; both callers already skip nil. Adds utils.IsWithin
and a unit test.

Verified: cockroach L1 106->0 failures, 85 dropped signatures all cgo glue,
real pkg/geo/geos project code preserved.
A quick key-skeleton map of the canonical v2 output: the node tree, the recursive
callable node, span shape, presence rules (always-present vs omitempty vs
emitted-when-true), and can:// id shapes. Authored from the JSON tags in
internal/schema/v2/schema.go; links to v2-l1-emission.md for the decisions.
- Add a step-by-step 'Generating analysis.json for a Go app' section
  (--analysis-schema 2 -a 2 -o <dir>, --app-name, verify, cgo note).
- Document the canonical v2 output shape alongside the legacy v1 shape,
  with a full JSON example verified against real emitter output.
- Fix the stale CLI options block (add --analysis-schema, --app-name).
The v2 call_graph edge list was emitted in Go-map iteration order, so two
runs of the same input (even at the same -j) produced byte-differing
analysis.json, failing the release determinism gate. Sort the emitted edges
by (src, dst, prov, weight) in emitCallGraph, matching the sorted-key
discipline already used for module output. Add a determinism gate test that
emits a reversed edge slice and asserts identical serialized call_graph.
Epic codellm-devkit/.github#94 and its two codeanalyzer-go children
(codellm-devkit#8 L1 tree emission, codellm-devkit#9 L2 call_graph refinement), plus the PR body.
Corrects child-1's app-id anchor to --app-name (matches the code and
CLAUDE.md) and aligns issue headings to the live feature_request form.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The committed design record for the Go Neo4j projection (--emit neo4j),
collision group D of the v1->v2 migration. A pure second projection of the
frozen v2 envelope into a GO_/Go-namespaced property graph, keyed on the same
can:// ids so JSON and graph never diverge. Cross-repo (analyzer + python-sdk
GoAnalysisBackend), tracked under epic codellm-devkit/.github#94.

- specs/neo4j-projection.md: triage, the two design-loop decision tables
  (analyzer graph vocabulary + SDK type-centric facade), package layout,
  release plan, definition of done.
- roadmap.md: milestones M1-M7 with commit boundaries, dependency DAG, and the
  test gate each must pass.
- issues/: ready-to-file feature_request drafts (parent under #94, M1 analyzer
  child, M7 SDK child) for maintainer filing where access is pull-only.
- CLAUDE.md: Neo4j-projection decisions section (auditable decision record).
- Carries the TS/Python design references and the prompt as design inputs.
Milestone M1 of the Neo4j projection (Closes codellm-devkit#11). The declarative single
source of truth for the graph vocabulary, before any projector or writer.

internal/neo4j/schema.go declares the GO_/Go-namespaced contract: node labels
(the Go set is narrower than Python's — no decorator/attribute/variable), the
shared :GoSymbol merge label, the :GoCanNode marker, relationship types incl.
GO_EMBEDS vs GO_SATISFIES (Go's two distinct inheritance mechanisms) and the
reserved L3/L4 overlay (declared now, zero rows until the levels land), and the
_k discriminants.

internal/neo4j/ddl.go derives the DDL from the node specs — one uniqueness
constraint per distinct (mergeLabel, key), so the symbol family collapses to a
single GoSymbol.id constraint — plus the curated :GoCanNode id range index that
makes scoped statements prefix-seekable. BuildSchemaDocument assembles the
--emit schema document.

internal/neo4j/emit.go: EmitSchema writes schema.neo4j.json (static, needs no
project). Wired into the CLI --emit schema branch, which now returns the
written path instead of "not yet implemented"; --emit neo4j stays stubbed until
its writers (M4-M6) land.

Gate (green): --emit schema writes a parseable schema.neo4j.json listing every
family; derived DDL has exactly one constraint per distinct (mergeLabel, key)
with the symbol family collapsed; every relationship endpoint names a declared
label; prefixes match the SDK's N/P. The conformance test
(projector-emits-only-declared) is a scaffold M3 fills.
Milestone M2 of the Neo4j projection. internal/neo4j/rows.go: the deterministic,
deduped bag both writers consume identically — GraphRows / NodeRow / EdgeRow /
NodeRef — plus the RowBuilder with in-memory MERGE semantics:

- Node() dedups on (labels[0], value): re-seeing an identity merges props
  (last-write-wins) and unions labels, so a hot external symbol collapses to one
  row. Returns a NodeRef edges address it by.
- Edge() is append-only; EdgeToSymbol() DEFERS an edge whose target may be
  external, kept at Finish() only if the target node was emitted (the
  edge-only-when-resolved rule — GO_EMBEDS/GO_SATISFIES/GO_RESOLVES_TO never
  dangle).
- prune() drops nil/empty-slice props (in Neo4j absence IS null).
- Finish() resolves deferred edges and sorts nodes/edges to a total order for
  byte-stable output.
- applicationPrefix() refuses a non-bare app id (so rows with no proper root get
  no destructive statement); descendantPrefix() appends "/" for strict
  containment. NodeRow.module is in-memory only — never emitted as a graph prop.
- cypherValue/cypherString/cypherMap render Neo4j-legal literals with sorted keys.

Gate (green): dedup+label-union, last-write-wins, deferred-edge drop/keep,
prune, order-stable Finish, applicationPrefix refusal across bare/empty/too-deep
ids, Cypher escaping + deterministic map rendering.
Milestone M3 of the Neo4j projection — the intellectual core. project.go walks
the canonical v2 Analysis tree in spine order (application -> module -> type ->
callable -> body call nodes -> call_graph -> imports) and emits a GraphRows
bag, reading can:// ids off the stamped tree so graph and JSON join on one
string (two-projection agreement). No I/O, no driver.

- Types: one :GoType node + kind property; base_types -> GO_EMBEDS and
  interfaces -> GO_SATISFIES via the deferred edge path (never dangle); struct
  fields -> :GoField/GO_HAS_FIELD; methods nest under the receiver type
  (GO_HAS_METHOD).
- Callables: error_channel/source_file/metrics flattened; closures ->
  GO_DECLARES; body call nodes keyed by the <callable-id>@<local> global
  ordinal, is_goroutine/is_deferred pruned when false; a resolved callee ->
  GO_RESOLVES_TO only when it names a declared callable.
- call_graph -> GO_CALLS (weight, prov); endpoints resolve to a declared
  callable or an id-keyed :GoExternal ghost, so no endpoint dangles.
- imports -> GO_IMPORTS aggregated per target (:GoModule in-project, else a
  :GoExternal ghost keyed by import path).
- span/metrics flatten to *_json string props (Neo4j can't store nested maps).

Fills M1's conformance scaffold: TestConformance_ProjectorEmitsOnlyDeclared
projects the multipackage fixture at L2 (real builder + resolver, 63 nodes/83
edges) and asserts the emitter produces no undeclared label/relationship/
property. Plus no-dangling, JSON<->graph id parity, determinism, and
Go-specific-shape gates. All green.
Milestone M4 of the Neo4j projection. cypher.go renders a GraphRows bag into a
self-contained, idempotent graph.cypher script that rebuilds this application's
subgraph from scratch. Block order: constraints + indexes (IF NOT EXISTS) ->
scoped wipe -> batched UNWIND...MERGE nodes -> batched UNWIND...MERGE edges
(500/batch).

The scoped wipe is anchored on :GoCanNode and the can://<app>/ id prefix, with
the root id matched separately (the root is outside its own descendant prefix).
It uses applicationPrefix, so a bag with no bare application root emits NO
destructive statement (visible as a SKIPPED comment) — one application by
construction, never the store, never a sibling analyzer's graph. Symbol-family
nodes MERGE on the shared :GoSymbol label and SET the specific kind as an extra
label; keyed edges MERGE on {_k: ...}.

Gate (green, DB-free): the script carries DDL + wipe + node/edge batches; is
byte-identical across runs; every DETACH DELETE is scoped on :GoCanNode + the
prefix; a no-root bag emits no wipe.
Milestone M5 of the Neo4j projection. bolt.go pushes a GraphRows bag into a
live Neo4j over Bolt, updating only what changed with the module subgraph as
the unit of idempotent replacement. Adds github.com/neo4j/neo4j-go-driver/v5
(pure Go — CGO_ENABLED=0 static builds still link; only exercised when
EmitNeo4j runs with a --neo4j-uri, off the JSON path).

- ensure constraints + indexes; schema-version gate (a stored-vs-producer
  mismatch forces a full re-upsert, never a delete);
- partition nodes by owning module (NodeRow.module); shared nodes (externals,
  neutral repo nodes) are MERGE-only, always upserted;
- diff each module's content_hash against the DB -> the changed set;
- per changed module, upsert; on --eager, purge its owned subtree first;
- upsert edges; on a full + eager run, orphan-prune vanished modules.

A push NEVER deletes by default (#171): the purge/prune steps run under --eager
only; lazy is purely additive. Every destructive statement is scoped on the
can://<app>/ id prefix anchored on :GoCanNode (#173), extracted into pure
query-builders so the scope invariant is unit-testable.

Gate: DB-free unit tests (partitioning, module-hash, param marshalling, and the
destructive-queries-are-scoped-and-anchored invariant) run on every `go test`;
a live round-trip (push, idempotent re-push, lazy-never-deletes) is in
bolt_integration_test.go behind the `neo4j_it` build tag. Static CGO-free build
verified.
Milestone M6 of the Neo4j projection, completing the analyzer arc. EmitNeo4j
projects the v2 Analysis (the SAME tree the JSON path emits) and writes it:
--neo4j-uri set → live Bolt push (incremental, additive unless --eager);
absent → a self-contained graph.cypher snapshot in the output dir.

CLI: --emit neo4j is unstubbed and shares the analysis path, but is ALWAYS
full-depth — it forces level 2 (max implemented) + canonical v2, and an
explicit -a/--analysis-level alongside it is a flag error ("--analysis-level
does not apply to --emit neo4j; the graph is always projected at full depth").
The Neo4j connection config threads through from the existing env-precedence
flags; --eager and a full (non-target-files) run gate the destructive push
steps.

Gate (green): --emit neo4j with no URI writes graph.cypher end-to-end (verified
byte-identical across runs — idempotent); the flag-error gate rejects -a with a
clear non-zero exit; --emit schema still writes the static contract. Static
CGO-free binary builds and runs. Full suite green.
cango now emits the canonical v2 tree by default; --analysis-schema 1 is the
opt-in escape hatch for the legacy v1 shape. Done before the first release, so
there are no v1-default consumers to break — the cleanest moment to flip it.

- main.go: flag default 1 -> 2, help text reordered to name v2 as default.
- main_test.go: DefaultSchemaIsV1 -> DefaultSchemaIsV2 (default output now
  carries schema_version + application); add AnalysisSchema1EmitsLegacyV1 to
  pin the escape hatch; the Level1/Level2 call-graph tests now read
  application.call_graph (v2) instead of the v1 top-level key.
- README: the four "v1 is the default" references corrected to v2.

The python-sdk GoCodeanalyzer already passes --analysis-schema 2 explicitly
and unconditionally, so this does not change SDK behaviour — it fixes the shape
a hand-run `cango` produces.
Fix gosimple S1016 in internal/neo4j/ddl.go: convert NodeSpec/RelSpec
to NodeDoc/RelDoc via type conversion instead of struct literals.

Fix errcheck on best-effort deferred cleanup:
- internal/neo4j/bolt.go: driver.Close / session.Close
- internal/utils/fs.go: f.Close
- internal/core/testsetup_test.go: os.RemoveAll
@lamwassi
lamwassi marked this pull request as ready for review October 6, 2026 19:35
Go permits many package-level `func init()` per package (one per file),
all sharing the signature "<pkgpath>.init". These are distinct callables
with distinct can:// ids (the id embeds the declaring file via its
module), but the emitter's flat signature->id index collapsed them with
last-writer-wins while ranging a Go map. The surviving id — and therefore
which init an edge's source resolved to — varied run to run, so the
call_graph edge set was nondeterministic and failed the release
determinism gate (byte-identical across runs and -j values). The downstream
edge sort was correct but ordered an unstable set.

Resolve an edge's source by (signature, declaring file) instead of bare
signature: GoCallEdge now carries SourcePath (the source callable's file,
already known where the edge is built), and emitCallGraph routes src
through a (signature, path)-keyed index so each init edge points to the
init that actually owns its call site. The flat index is kept for the
unique common case (and for targets, which are never init) and is now
deterministic on collision (smallest id wins) as a backstop. No change to
the shared signatureOf canonicalizer; the Neo4j projection reuses the
emitter's ids and inherits the fix with no change of its own.

Add a fresh-build determinism gate over the chi fixture (the only one with
multiple init per package): it rebuilds the symbol table + call graph from
disk 16 times and asserts a byte-identical call_graph, catching the class
the existing single-build determinism test could not. A focused test
asserts the three middleware init nodes are distinct and each init-source
edge resolves to its own file.
@pavuluri
pavuluri merged commit e92de21 into codellm-devkit:main Oct 9, 2026
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Neo4j schema contract (schema.go) + conformance test + --emit schema

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