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Implement domain actions (fill, set, remove) #296

Description

@BryanRumsey
  • The domain needs a data structure to store actions and preserve the order of application.
  • also needs functions to add new actions.
    • add_fill_action
    • add_set_action
    • add_remove_action
  • Refactor the following functions to use the above functions
    • fill_with_particles should use add_fill_action
    • set_properties should use add_set_action

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