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Is this tool compatible with T2T-CHM13 reference? #8

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@ywzhang071394

Hi,

Thank you for the nice tool. I saw that the pre-built files are all designed for hg38 and hg19 reference. Is this tool compatible with t2T reference? If so, how can I set up the parameters?

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  1. kefazhang commented on Dec 4, 2024

    @kefazhang

    Hi,

    Thank you for the nice tool. I saw that the pre-built files are all designed for hg38 and hg19 reference. Is this tool compatible with t2T reference? If so, how can I set up the parameters?

    Hi,
    II have similar needs as you, and I would like to know if you have solved this problem. Thanks!

  2. ywzhang071394 commented on Dec 4, 2024

    @ywzhang071394
    Author

    Nope, i have used another strategy instead.

  3. DayTimeMouse commented on Dec 7, 2024

    @DayTimeMouse

    Hi ywzhang071394,

    Could you please tell me some strategy to validate SV? I'd like to validate called SV.

    Thanks in advance.

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