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CellMigrationLab
morphobricks-preprocessing
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Fix cross-brick test findings F1, F8, F9, F10, F11
- #139
#139
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guijacquemet
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Nov 3, 2026
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Fix cross-brick test findings F1, F8, F9, F10, F11
#139
guijacquemet
merged 9 commits into
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CellMigrationLab/morphobricks-preprocessing:main
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claude/fix-xbrick-preprocessing
CellMigrationLab/morphobricks-preprocessing:claude/fix-xbrick-preprocessing
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Scan a stated shared 2-D mask with per-plane masks (F1)
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Run images that name their axes without --axes (F9)
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Keep the manifest bytes on a rerun that changes nothing (F10)
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Call a dead process's lock stale; word a resumed run's summary (F11)
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Name the runs' output folder in convert's next commands; say convert keeps the order (F8)
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Document the cross-brick fixes F1, F8, F9, F10, F11 (plan question 73)
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Keep metadata.py and test_run.py within their size baseline
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Call convert's lock of a stopped conversion stale, and keep it (F11, review of #139)
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Say --axes is not needed when every image names its axes; never print --axes None (F9, review of #139)
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