This document tracks the CLI command reference coverage in docs/commands/ against the atomic binary (verified against CLI 0.17.1 --help output).
Every top-level command of the CLI has a reference page in docs/commands/:
| Page | Command | Notes |
|---|---|---|
| overview.md | — | Command reference overview with categories |
| completions.md | completions |
Shell completion scripts |
| init.md | init |
Initialize a new repository |
| status.md | status |
Working copy status (incl. --reindex, --no-untracked) |
| conflicts.md | conflicts |
Conflicted files |
| add.md | add |
Track files (incl. -A/--all, -d/--directory) |
| remove.md | remove / rm |
Remove from tracking |
| move.md | move / mv |
Move/rename tracked files |
| restore.md | restore |
Restore working copy |
| record.md | record |
Record changes (incl. --allow-conflict-markers) |
| revise.md | revise |
Revise a change in-place |
| unrecord.md | unrecord |
Remove a change from the current view |
| diff.md | diff |
Working-copy diffs (incl. -c/--change, --word-diff, --name-status) |
| log.md | log |
History (incl. -f/--format, --full-hash) |
| change.md | change |
Change details (incl. --format, --show-hunks, --full-hash) |
| insert.md | insert |
Insert changes into a view |
| split.md | split |
Create a view from an existing one |
| view.md | view |
Views: create, split, switch, list, delete, promote |
| stash.md | stash |
Rewritten to 0.17.x interface (push + -u/-k, 7 subcommands) |
| tag.md | tag |
create, delete, list, show |
| clone.md | clone |
Remote clone (incl. --into-existing, --all-views) |
| push.md | push |
Remote push (incl. --to-view/--from-view, --insecure, --timeout) |
| pull.md | pull |
Remote pull (incl. --to-view/--from-view, --insecure, --timeout) |
| remote.md | remote |
add, remove, set-url, rename, default |
| identity.md | identity |
Identities and signing keys |
| server.md | server |
Server profiles, incl. set-identity |
| workspace.md | workspace / ws |
Hosted workspaces, incl. grant (list/add/remove) |
| project.md | project / proj |
Hosted projects |
| org.md | org |
Organizations, incl. upgrade and member (list/add/update/remove) |
| team.md | team |
Teams, incl. member (list/add/update/remove) |
| agent.md | agent |
enable, disable, status, explain, attest |
| agent-lifecycle.md | agent lifecycle |
Managed runs: begin, renew, end, status |
| session.md | session |
Session ledger: show, fork, rebuild |
| sandbox.md | sandbox |
Agent sandboxes: create, stage, seal |
| doctor.md | doctor |
Diagnose and repair indexes |
| git.md | git |
Git interop: import, push, hooks (install/uninstall/status) |
| query.md | query |
Knowledge graph: search, neighbors, callers, entities, code, graph, index, embed, enrich, reindex, plan, ask |
| vault.md | vault |
Knowledge store: init, show, list, materialize, sync, goal, context, summaries |
| intent.md | intent |
Directive-based intents |
| memory.md | memory |
Durable memories |
| provenance.md | provenance |
W3C PROV trace/show |
| update.md | update |
CLI upgrade checks |
| triage.md | triage |
Review candidate sets: candidates, review |
- Options, subcommands, and arguments were transcribed from
atomic <command> --help(CLI 0.17.1) and cross-checked against the live binary. - Identifier requirements (change hashes, KG node/entity IDs, session IDs, run IDs,
stash refs) are documented on the pages that need them, with pointers to the
discovery command (
log,query search,query entities,session show,agent lifecycle status,stash list,tag list,view list).
- Command Definitions:
atomic/atomic/src/commands/*.rs - Core Library:
atomic/atomic-core/src/*.rs - Command Structure:
atomic/atomic/src/commands/mod.rs
Run atomic <command> --help locally for the authoritative, version-specific help text.