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Copy pathSampleScript.py
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457 lines (402 loc) · 19.5 KB
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# Import required packages
import pyreadstat
import pandas as pd
import os
from datetime import datetime
import numpy as np
# Global Variables for Easy Editing
SURVEY_TYPE = "Insert Data"
RESPONSE_TYPE = "Insert Data"
CLUB_INDEX = "Insert Data"
CLUB_NAME = "Insert Data"
CLUB_ADDRESS_CITY = "Insert Data"
CLUB_ADDRESS_STATE = "Insert Data"
CLUB_ADDRESS_ZIP = "Insert Data"
DUE_DATE = "Insert Data" # ISO 8601 Date Format
CLUB_CATEGORY = "Insert Data"
CLUB_TYPE = 10
CLUB_ADDRESS_REGION = 10
TOTAL_MEMBER_COUNT = 10
TOTAL_SPOUSE_COUNT = 10
SURVEY_RESPONSE_MEMBER = None #will be updated dynamically
SURVEY_RESPONSE_SPOUSE = None #will be updated dynamically
TOTAL_RESPONSE_COUNT = None #will be updated dynamically
# Path Configuration
BASE_PATH = r"C:\\Insert\\Directory\\Folder\\Path"
MEMBER_FILE = "Insert SAV Path"
SPOUSE_FILE = "Insert SAV Path"
OUTPUT_FILE = "Insert Output File Path"
METADATA_FILE = "Insert Metadata File Path"
# Variables to Delete
UNNECESSARY_VARIABLES = [
'Status', 'RecipientLastName', 'RecipientFirstName',
'RecipientEmail', 'DistributionChannel', 'UserLanguage', 'ExternalReference'
]
def rename_variable(df, meta, old_name, new_name):
"""
Rename a variable in the DataFrame and update metadata.
"""
if old_name not in df.columns:
print(f"Variable '{old_name}' not found. Skipping rename.")
return df, meta
print(f"Renaming variable '{old_name}' to '{new_name}'...")
# Rename the column in the DataFrame
df = df.rename(columns={old_name: new_name})
# Update metadata
meta.column_names = [new_name if name == old_name else name for name in meta.column_names]
meta.column_labels = [new_name if label == old_name else label for label in meta.column_labels]
if old_name in meta.variable_value_labels:
meta.variable_value_labels[new_name] = meta.variable_value_labels.pop(old_name)
if old_name in meta.variable_display_width:
meta.variable_display_width[new_name] = meta.variable_display_width.pop(old_name)
if old_name in meta.variable_measure:
meta.variable_measure[new_name] = meta.variable_measure.pop(old_name)
if old_name in meta.original_variable_types:
meta.original_variable_types[new_name] = meta.original_variable_types.pop(old_name)
if old_name in meta.variable_storage_width:
meta.variable_storage_width[new_name] = meta.variable_storage_width.pop(old_name)
print(f"Variable '{old_name}' successfully renamed to '{new_name}'.")
return df, meta
def clean_sysmis_responses(df, start_index, end_index):
columns_to_check = df.columns[start_index:end_index]
print(f"Cleaning SYSMIS responses for columns: {list(columns_to_check)}")
def is_missing(row):
return all(
pd.isna(val) or str(val).strip() == "" or val in [" ", ""]
for val in row
)
initial_responses = len(df)
mask = ~df[columns_to_check].apply(is_missing, axis=1)
cleaned_df = df[mask]
cleaned_responses = len(cleaned_df)
removed_rows = initial_responses - cleaned_responses
print(f"Number of initial responses: {initial_responses}")
print(f"Number of cleaned responses: {cleaned_responses}")
print(f"Number of rows removed: {removed_rows}")
return cleaned_df, cleaned_responses
def delete_unnecessary_variables(df, meta, variables_to_delete):
print(f"Attempting to delete the following variables: {variables_to_delete}")
existing_variables = [var for var in variables_to_delete if var in df.columns]
print(f"Variables found for deletion: {existing_variables}")
df = df.drop(columns=existing_variables, errors="ignore")
updated_columns = list(df.columns)
keep_indices = [i for i, name in enumerate(meta.column_names) if name in updated_columns]
meta.column_names = updated_columns
meta.column_labels = [meta.column_labels[i] for i in keep_indices]
meta.variable_value_labels = {k: v for k, v in meta.variable_value_labels.items() if k in updated_columns}
meta.variable_display_width = {k: v for k, v in meta.variable_display_width.items() if k in updated_columns}
meta.variable_measure = {k: v for k, v in meta.variable_measure.items() if k in updated_columns}
meta.original_variable_types = {k: v for k, v in meta.original_variable_types.items() if k in updated_columns}
meta.variable_storage_width = {k: v for k, v in meta.variable_storage_width.items() if k in updated_columns}
print(f"Variables deleted successfully. Remaining variables: {updated_columns}")
return df, meta
def process_and_clean_file_with_metadata(file_path, output_path, start_index, end_index, variables_to_delete=None):
print(f"Reading file: {file_path}")
data, meta = pyreadstat.read_sav(file_path)
print(f"Original metadata variable count: {len(meta.column_names)}")
# Ensure original_variable_types exists in metadata
if not hasattr(meta, "original_variable_types"):
meta.original_variable_types = {var: "unknown" for var in meta.column_names}
cleaned_data, cleaned_responses = clean_sysmis_responses(data, start_index, end_index)
if variables_to_delete:
cleaned_data, meta = delete_unnecessary_variables(cleaned_data, meta, variables_to_delete)
metadata_kwargs = {
"variable_value_labels": meta.variable_value_labels,
"column_labels": meta.column_labels,
"variable_display_width": meta.variable_display_width,
"variable_measure": meta.variable_measure,
"variable_format": meta.original_variable_types,
}
print("Saving cleaned file with metadata...")
pyreadstat.write_sav(
cleaned_data,
output_path,
**metadata_kwargs
)
print(f"File saved to: {output_path}")
return cleaned_data, meta, cleaned_responses
def add_variables_to_dataframe(df, meta, new_variables):
print("Adding new variables to the DataFrame...")
for var_name, var_info in new_variables.items():
df[var_name] = var_info.get('data', [None] * len(df))
if var_name not in meta.column_names:
meta.column_names.append(var_name)
meta.column_labels.append(var_info.get('label', var_name))
if 'value_labels' in var_info:
meta.variable_value_labels[var_name] = var_info['value_labels']
if 'measure' in var_info:
meta.variable_measure[var_name] = var_info['measure']
if 'display_width' in var_info:
meta.variable_display_width[var_name] = var_info['display_width']
if 'original_variable_type' in var_info:
meta.original_variable_types[var_name] = var_info['original_variable_type']
print(f"New variables added: {list(new_variables.keys())}")
return df, meta
def reorder_variables(df, meta, order):
"""
Reorder variables in the DataFrame and update metadata to match the new order.
Args:
df (pd.DataFrame): The DataFrame to reorder.
meta (pyreadstat.metadata_container): Metadata for the DataFrame.
order (list): The desired variable order. Variables not in the list will be appended.
Returns:
df, meta: Updated DataFrame and metadata with reordered variables.
"""
print("Reordering variables...")
# Ensure all specified variables exist in the DataFrame
available_order = [var for var in order if var in df.columns]
remaining_vars = [var for var in df.columns if var not in available_order]
# New column order
new_order = available_order + remaining_vars
# Reorder DataFrame columns
df = df[new_order]
# Update metadata attributes to match the new order
keep_indices = [meta.column_names.index(var) for var in new_order]
meta.column_names = new_order
meta.column_labels = [meta.column_labels[i] for i in keep_indices]
meta.variable_value_labels = {k: v for k, v in meta.variable_value_labels.items() if k in new_order}
meta.variable_display_width = {k: meta.variable_display_width[k] for k in new_order if k in meta.variable_display_width}
meta.variable_measure = {k: meta.variable_measure[k] for k in new_order if k in meta.variable_measure}
meta.original_variable_types = {k: meta.original_variable_types[k] for k in new_order if k in meta.original_variable_types}
meta.variable_storage_width = {k: meta.variable_storage_width[k] for k in new_order if k in meta.variable_storage_width}
print(f"Variables reordered: {new_order}")
return df, meta
def adjust_variable_storage(df, meta, start_index=29):
"""
Adjust storage width and variable types based on SPSS requirements:
- Numeric (F) variables: F8.0 format with storage width 8
- String (A) variables: A16000 format with storage width 16000
"""
print("Adjusting storage width and variable types...")
# Initialize metadata dictionaries if they don't exist
if not hasattr(meta, 'variable_storage_width'):
meta.variable_storage_width = {}
if not hasattr(meta, 'original_variable_types'):
meta.original_variable_types = {}
if not hasattr(meta, 'variable_display_width'):
meta.variable_display_width = {}
for idx, column_name in enumerate(meta.column_names[start_index:], start=start_index):
if column_name in df.columns:
if column_name in meta.original_variable_types:
var_type = meta.original_variable_types[column_name]
if var_type.startswith("F"): # Numeric
meta.variable_storage_width[column_name] = 8
meta.original_variable_types[column_name] = "F8.0"
elif var_type.startswith("A"): # String
meta.variable_storage_width[column_name] = 16000
meta.original_variable_types[column_name] = "A16000"
else:
print(f"Variable {column_name} type not found in metadata, skipping.")
# Verify changes
print("\nVerifying metadata changes:")
print("Sample string variable formats:")
string_vars = [name for name in df.columns if not pd.api.types.is_numeric_dtype(df[name])][:5]
for var in string_vars:
print(f"{var}: format={meta.original_variable_types[var]}, storage_width={meta.variable_storage_width[var]}")
return df, meta
def synchronize_metadata_with_dataframe(df, meta):
print("Synchronizing metadata with the DataFrame...")
updated_columns = list(df.columns)
keep_indices = [i for i, name in enumerate(meta.column_names) if name in updated_columns]
meta.column_names = updated_columns
meta.column_labels = [meta.column_labels[i] for i in keep_indices]
meta.variable_value_labels = {k: v for k, v in meta.variable_value_labels.items() if k in updated_columns}
meta.variable_display_width = {k: v for k, v in meta.variable_display_width.items() if k in updated_columns}
meta.variable_measure = {k: v for k, v in meta.variable_measure.items() if k in updated_columns}
meta.original_variable_types = {k: v for k, v in meta.original_variable_types.items() if k in updated_columns}
meta.variable_storage_width = {k: v for k, v in meta.variable_storage_width.items() if k in updated_columns}
print(f"Metadata synchronized. Remaining columns: {updated_columns}")
return meta
def main():
start_index = 30
end_index = 48
global SURVEY_RESPONSE_MEMBER, SURVEY_RESPONSE_SPOUSE
# Process and Clean Member File
member_file_path = os.path.join(BASE_PATH, MEMBER_FILE)
member_output_path = os.path.join(BASE_PATH, "Cleaned_Member.sav")
member_data, member_meta, member_responses = process_and_clean_file_with_metadata(
member_file_path, member_output_path, start_index, end_index, UNNECESSARY_VARIABLES
)
SURVEY_RESPONSE_MEMBER = member_responses # Update global variable
# Rename variable in Member File
member_data, member_meta = rename_variable(member_data, member_meta, "Duration__in_seconds_", "ResponseDurationSeconds")
# Process and Clean Spouse File
spouse_file_path = os.path.join(BASE_PATH, SPOUSE_FILE)
spouse_output_path = os.path.join(BASE_PATH, "Cleaned_Spouse.sav")
spouse_data, spouse_meta, spouse_responses = process_and_clean_file_with_metadata(
spouse_file_path, spouse_output_path, start_index, end_index, UNNECESSARY_VARIABLES
)
SURVEY_RESPONSE_SPOUSE = spouse_responses # Update global variable
# Rename variable in Spouse File
spouse_data, spouse_meta = rename_variable(spouse_data, spouse_meta, "Duration__in_seconds_", "ResponseDurationSeconds")
# Update Global Variables
TOTAL_RESPONSE_COUNT = SURVEY_RESPONSE_MEMBER + SURVEY_RESPONSE_SPOUSE
print("Merging cleaned files...")
merged_data = pd.concat([member_data, spouse_data], ignore_index=True)
# Define Variables to Add
new_variables = {
"SurveyType": {
"data": [SURVEY_TYPE] * len(merged_data),
"label": "SurveyType",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"RespondentType": {
"data": [RESPONSE_TYPE] * len(merged_data),
"label": "RespondentType",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"ClubIndex": {
"data": [CLUB_INDEX] * len(merged_data),
"label": "ClubIndex",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"ClubName": {
"data": [CLUB_NAME] * len(merged_data),
"label": "ClubName",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"ClubAddressCity": {
"data": [CLUB_ADDRESS_CITY] * len(merged_data),
"label": "ClubAddressCity",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"ClubAddressState": {
"data": [CLUB_ADDRESS_STATE] * len(merged_data),
"label": "ClubAddressState",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"ClubAddressZip": {
"data": [CLUB_ADDRESS_ZIP] * len(merged_data),
"label": "ClubAddressZip",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A200"
},
"ClubCategory": {
"data": [CLUB_CATEGORY] * len(merged_data),
"label": "ClubCategory",
"display_width": 15,
"measure": "nominal",
"original_variable_type": "A32"
},
"DueDate": {
"data": [DUE_DATE] * len(merged_data),
"label": "DueDate",
"display_width": 5,
"measure": "scale",
"original_variable_type": "DATETIME11"
},
"ClubType": {
"data": [CLUB_TYPE] * len(merged_data),
"label": "ClubType",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"ClubAddressRegion": {
"data": [CLUB_ADDRESS_REGION] * len(merged_data),
"label": "ClubAddressRegion",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"ClubTotalMemberCount": {
"data": [TOTAL_MEMBER_COUNT] * len(merged_data),
"label": "ClubTotalMemberCount",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"ClubTotalSpouseCount": {
"data": [TOTAL_SPOUSE_COUNT] * len(merged_data),
"label": "ClubTotalSpouseCount",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"ClubResponseMember": {
"data": [SURVEY_RESPONSE_MEMBER] * len(merged_data),
"label": "ClubResponseMember",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"ClubResponseSpouse": {
"data": [SURVEY_RESPONSE_SPOUSE] * len(merged_data),
"label": "ClubResponseSpouse",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"TotalClubResponse": {
"data": [TOTAL_RESPONSE_COUNT] * len(merged_data),
"label": "TotalClubResponse",
"display_width": 5,
"measure": "scale",
"original_variable_type": "F8.0"
},
"ClubMainInitiationFee": {
"data": [None] * len(merged_data),
"label": "ClubMainInitiationFee",
"display_width": 5,
"measure": "scale",
"original_variable_type": "DOLLAR12.0"
},
"ClubMainAnnualFee": {
"data": [None] * len(merged_data),
"label": "ClubMainAnnualFee",
"display_width": 5,
"measure": "scale",
"original_variable_type": "DOLLAR12.0"
}
}
merged_data, member_meta = add_variables_to_dataframe(merged_data, member_meta, new_variables)
merged_meta = synchronize_metadata_with_dataframe(merged_data, member_meta)
# Define the desired variable order
desired_order = [
"ResponseId", "IPAddress", "LocationLatitude", "LocationLongitude",
"ResponseDurationSeconds", "Progress", "Finished", "StartDate", "EndDate",
"RecordedDate", "DueDate", "SurveyType", "RespondentType", "ClubIndex",
"ClubName", "ClubCategory", "ClubTotalMemberCount", "ClubTotalSpouseCount",
"ClubResponseMember", "ClubResponseSpouse", "TotalClubResponse",
"ClubMainInitiationFee", "ClubMainAnnualFee", "ClubType", "ClubAddressRegion",
"ClubAddressCity", "ClubAddressState", "ClubAddressZip"
]
# Reorder variables in the merged DataFrame and metadata
merged_data, merged_meta = reorder_variables(merged_data, merged_meta, desired_order)
# Adjust variable storage for variables starting at position 29
merged_data, merged_meta = adjust_variable_storage(merged_data, merged_meta, start_index=29)
# Ensure metadata and DataFrame are synchronized after changes
merged_meta = synchronize_metadata_with_dataframe(merged_data, merged_meta)
if len(merged_meta.column_labels) != len(merged_data.columns):
merged_meta.column_labels = merged_data.columns.tolist()
print("Metadata before saving:")
print("Variable Display Widths:", merged_meta.variable_display_width)
print("Variable Formats:", merged_meta.original_variable_types)
print("Variable Storage Widths:", merged_meta.variable_storage_width)
output_file_path = os.path.join(BASE_PATH, OUTPUT_FILE)
print("Saving merged file with metadata...")
pyreadstat.write_sav(
merged_data,
output_file_path,
variable_value_labels=merged_meta.variable_value_labels,
column_labels=merged_meta.column_labels,
variable_display_width=merged_meta.variable_display_width,
variable_measure=merged_meta.variable_measure,
variable_format=merged_meta.original_variable_types
)
print(f"Merged file saved to: {output_file_path}")
if __name__ == "__main__":
main()